| Protein: | SPAP8A3.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1274 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAP8A3.12c.
| Description | E-value | Query Range |
Subject Range |
|
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999.0 | [0..58] | [1256..1] |
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995.0 | [0..58] | [1256..1] |
|
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988.0 | [0..58] | [1256..1] |
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988.0 | [0..58] | [1256..1] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MKFRLNANFN FSFRRYCFVQ CRNKYHSHVR YLSSAKKSGI LRNSYNQRTE RYFTNIMIPS 60
61 DYSNKFYPVD GVVPKHETQA YEFLKKFPEY DGRGVTVGIL DTG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.243 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.470 | a.47.2 | t-snare proteins |
| View | Download | 0.251 | a.24.3 | Cytochromes |
| View | Download | 0.257 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.201 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [104-702] |
1 11 21 31 41 51
| | | | | |
1 VDPGAPGLSV TTTGLPKFKN IVDCTGAGDV DTSVEVAAAD SNDYLTITGR SGRTLKLSKE 60
61 WKNPSKKWKV GCKLAYEFFP KDLRKRLQKL ETEDMNKSNR KLLQDATDEY AKFKDKFPEA 120
121 PLDKDNLQTQ KELEARIECL KQLAEKFDNP GPLYDVVVFH DGEHWRVVID SDQTGDIYLH 180
181 KPLADFNVAQ EWSTFGSLDL LSYGVHVYDN GNITSIVAVS GTHGTHVAGI IGANHPETPE 240
241 LNGAAPGCQL VSLMIGDGRL DSLETSHAFS RACSEIIKNE VDIINISFGE DAGIPNKGRV 300
301 IELLRDELAG KRNVVIVSSA GNNGPAYTTV GAPGGTTFDV ISVGAYVTSG MMQAQYNLLS 360
361 TVHDTPYTWC SRGPTLDGDT GVSIYAPGGA ITSVPPYSLQ NSQLMNGTSM SSPSACGGIS 420
421 LILSALKAQK KPYTAAAIKK AVMYTSKDLR DDFNTGMLQV DNAYEYLAQS DFQYTGARSF 480
481 TINGNIGNSK RGVYLRNPTE VCSPSRHMFN VAPKFEDGEE YEKSHFEVQL SLATTQPWIQ 540
541 APEYVMMAGT GRGIPVRVDP TALAPGHHFG KVLAYDASNE SRRCVFEIPV TVMKPSSIS
|
| Detection Method: | |
| Confidence: | 30.09691 |
| Match: | 1xf1A |
| Description: | Structure of C5a peptidase- a key virulence factor from Streptococcus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [703-1274] |
1 11 21 31 41 51
| | | | | |
1 NTCFSLRDVS FEPTLIKRHF LVPPKGATYV EIRVKATSEL ESTNMLWISV NQTIPQTKLN 60
61 EASTELIMPV TQNEVTTKLV SIDDSYTLEL CMAQWWSSLE PMVLDIDVNF HGIKVVNGKE 120
121 INLISSQGLK RVDCASIRRE NFKPDITLKD YVDSFKPTNT VIKPLGDRDI MPDGQQLFEL 180
181 MATYSVEISE KTELKADFAV PHNMYDNGFN GLFFMVFDSQ KQRVHYGDMY TSSHTLEKGE 240
241 YLYKFQLLSV DPSTLERFRN VTLRLTKKLK KPITLPLYAD HIDFCDNKTY ERENIDAGVV 300
301 ESFVVGTNIE GEQYASELKE NSLLTGELKF GDCEKGTVPV TLVLPPKIST KEDTKLGEKC 360
361 ANIVQLQVDL LSKLADQEKE KHLKYLQSSY KNSLEVQLAK LDIVKETNER LSTADSILSL 420
421 IDTEALSRYY SCQQKVEDTI PRDVVLEKKM ALQRDAFIRA LVVKCETFST QGHKDKDNYF 480
481 QNYQLLLNWL ENSDPRVWQI KKDYYKSQNQ YGLALKALLE LLKENGNSGK MDVAKLLSEE 540
541 KELLVNLGWN YWHDIVFVET VKRVPPYSYA LF
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| Detection Method: | |
| Confidence: | 2.28 |
| Match: | 2cg9A |
| Description: | No description for 2cg9A was found. |
