Protein: | SPBC28F2.11 |
Organism: | Schizosaccharomyces pombe |
Length: | 310 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC28F2.11.
Description | E-value | Query Range |
Subject Range |
|
154.0 | [0..15] | [205..360] |
|
152.0 | [0..7] | [214..341] |
|
147.0 | [0..16] | [190..684] |
|
141.0 | [0..99] | [287..34] |
|
140.0 | [0..96] | [291..31] |
|
140.0 | [0..96] | [291..31] |
|
140.0 | [0..96] | [291..31] |
|
139.0 | [0..79] | [291..14] |
|
139.0 | [0..96] | [287..31] |
Region A: Residues: [1-109] |
1 11 21 31 41 51 | | | | | | 1 MAQNSTQLEK ISGSFTRLAE AFQLALTACR EIEESLPSIL GEKSEVSKPF KPAVTDPSNA 60 61 KKEINMAIES PSKKATSPKK ATPAAVAPVE ATSAVDTSEA VASMTPNKR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [110-310] |
1 11 21 31 41 51 | | | | | | 1 KARDPAQPKR PPSAYNLFQK NQRSEIKESL GEKSNDVKEV NKAMHEKWGS LSEDDRKTYE 60 61 EEASKLREAY EEEMAAYNAS KENASVADSR VTAEETSTKP SEDLSSPTKK DLIDFSETRP 120 121 LAQASRATPD IKEQHAKKPK RKHTRSTVPT SNVEPVSQPQ PSPDKIVSSP NPPSAKREKK 180 181 KRRKSSMSSS ITTPPTAKVA N |
Detection Method: | ![]() |
Confidence: | 28.69897 |
Match: | 2gzkA |
Description: | No description for 2gzkA was found. |
Term | Confidence | Notes |
binding | 3.1918149935012 | bayes_pls_golite062009 |
DNA binding | 2.9192628885142 | bayes_pls_golite062009 |
nucleic acid binding | 2.69023297073035 | bayes_pls_golite062009 |
transcription regulator activity | 2.58116094906635 | bayes_pls_golite062009 |
transcription factor activity | 1.78719688305492 | bayes_pls_golite062009 |
sequence-specific DNA binding | 1.45429159567789 | bayes_pls_golite062009 |
transcription repressor activity | 1.20795951017807 | bayes_pls_golite062009 |
protein binding | 1.131658134984 | bayes_pls_golite062009 |
transcription factor binding | 0.3855089242113 | bayes_pls_golite062009 |
chromatin binding | 0.26686706452968 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 0.1389551657237 | bayes_pls_golite062009 |
transcription activator activity | 0.0268189092037101 | bayes_pls_golite062009 |