YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC688.09
Organism:	Schizosaccharomyces pombe
Length:	361 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC688.09.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	268.0	[0..42]	[360..174]
gi\|60466585, gi\|... - gi\|66808853\|ref\|XP_638149.1\| EF-hand domain-containing protein [Dictyostelium discoideum AX4], gi\|60... MCFB_DICDI - Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	264.0	[0..46]	[360..136]
gi\|88182542, gi\|... - gi\|88182542\|gb\|EAQ90010.1\| hypothetical protein CHGG_06629 [Chaetomium globosum CBS 148.51], gi\|1161...	264.0	[0..31]	[360..40]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	263.0	[0..36]	[359..198]
gi\|46130654, gi\|... - gi\|46130654\|ref\|XP_389107.1\| hypothetical protein FG08931.1 [Gibberella zeae PH-1], gi\|42548791\|gb\|E...	263.0	[0..32]	[360..40]
gi\|68360590 - gi\|68360590\|ref\|XP_697689.1\| PREDICTED: similar to mitochondrial Ca2+-dependent solute carrier [Dani...	262.0	[0..4]	[361..206]
SCMC2_XENLA - Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1	261.0	[0..4]	[361..184]
SCMC2_XENTR - Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1	261.0	[0..4]	[361..183]
gi\|114189159, gi... - gi\|115402473\|ref\|XP_001217313.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	260.0	[0..37]	[361..47]

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Predicted Domain #1

Region A:
Residues: [1-361]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLHCQEPKI RSLDMLSNSE IKPSENSQKT KVLLTKANNA SNERAPPPLS HFIAGGVAGM  60
   61 LGAIATAPLD VVKTRLQSDF YKDRFLKQTA KSKSPLTAAY RHFMDTCIIL KNVKVHEGTR 120
  121 ALFRGLGPNL IGTIPARSIN FFSYGNGKRI LADLFNNGQE NSQIHLMAAA IAGVITSAAT 180
  181 NPIWLVKTRL QLDKKSGQAA QYRSSIDCII KTIRLEGFRG LYKGLSASLL GVGESTLQWV 240
  241 LYEKFKHAVA IRQLRRKELG IQETIYDKVL DWGGKLGGAG IAKFMAAGIA YPHEVVRTRL 300
  301 RQSPSINGTP KYTGLIQCFK LVWMEQGIVG LYGGLTAHLL RVVPNACILF GSYEVIMHFI 360
  361 G

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	67.221849
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits