| Protein: | ynd1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ynd1.
| Description | E-value | Query Range |
Subject Range |
|
|
542.0 | [0..4] | [540..9] |
|
|
492.0 | [0..4] | [511..6] |
|
|
484.0 | [0..3] | [471..189] |
|
|
483.0 | [0..3] | [471..29] |
|
|
483.0 | [0..3] | [471..207] |
|
|
482.0 | [0..3] | [471..87] |
|
|
480.0 | [0..3] | [471..83] |
|
|
480.0 | [0..2] | [522..1] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 MVRKYGIFID AGSSGSRLLI YSWDYDTDSS LSDKVKKLPL IETGIGDGGK WSLKVQPGIS 60
61 SFANNPKHVG KKHLKELLDF AAHAIPKDVH KETPVFLSAT AGMRLLGVDA QNKILSHACR 120
121 YIKKNYDFDI PNCSNSIRVI DGKAEGMYGW LATNYLLKTL EEKDTSTVGF LDMGGASVQI 180
181 AFELPPSQLK NYKDSISTVH IGLQNGQQLE YPLFVTTWLG FGANEAYRRY LGLLIES
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2j4rA |
| Description: | No description for 2j4rA was found. |
|
Region A: Residues: [238-352] |
1 11 21 31 41 51
| | | | | |
1 ENGKVGNTLS DPCSLRGRTY DIDGIEFAGT GDLKQCLKLT YNLLNKDKPC SMDPCNFDGI 60
61 SIPPVDFANT EFVGVSEFWY TTNDVFDMGG SYHFPNFYKK VDEYCGTEWE TMLSR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [353-436] |
1 11 21 31 41 51
| | | | | |
1 LYNKELTPST DENKLEKLCF KASWALNVLH EGFDVPKSNT SSNDAKDGLS VIPAYHSPFT 60
61 SLEKIERTEV SWTLGQVLLY ASNQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.334 | 0.715 | Golgi apparatus | d.58.17 | Metal-binding domain |
| View | Download | 0.338 | 0.008 | Golgi apparatus | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.335 | 0.002 | Golgi apparatus | d.80.1 | Tautomerase/MIF |
| View | Download | 0.455 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.406 | N/A | N/A | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
|
Region A: Residues: [437-572] |
1 11 21 31 41 51
| | | | | |
1 QLLAKPEYAN YYMDPYGKLI ASPSKHWMRL FPNKLFFILS FIFCLFFLFS LVLFGYDPKR 60
61 RQRFKKFLLR LQRRKAPYIM SANGSYEDIA DFSDDLEMSS PSKWHGPPIR TTSSHVLADR 120
121 LSFTASRERT PRSPFP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
