| Protein: | SPBC20F10.08c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 747 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC20F10.08c.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..142] | [630..247] |
|
|
262.0 | [0..137] | [736..1319] |
|
|
260.0 | [0..137] | [736..314] |
|
|
260.0 | [0..137] | [736..400] |
|
|
259.0 | [0..137] | [736..1171] |
|
|
259.0 | [0..137] | [736..945] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MDANQKLLDF AKLLNQKNDS RPVIEKLKDN ISGDLLNYFL NLLEEISKLD TDQPLSVTSL 60
61 RCLQLFVHLT FLLGVYTQLP KEMLSQAKIK ALPIYTPKKN LVQIYNILLP LLLTPSLLQG 120
121 PLNLHYADLL LLHLYLLNC
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | a.25.1 | Ferritin-like |
| View | Download | 0.705 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.503 | a.63.1 | Apolipophorin-III |
| View | Download | 0.648 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.530 | a.25.1 | Ferritin-like |
|
Region A: Residues: [140-330] |
1 11 21 31 41 51
| | | | | |
1 HEQGSLIEEP RPLFLDPSWK EKVTSIMSPQ MVDPSKMISS CLSLLQPNVD NWLQDKLKHY 60
61 LTTCLCRETG VQGFLKVYMQ AQPNSIERAR QAAHLISSVP KDISPQKYFS CILPQVWSLF 120
121 STQPRLASQL IIAVTNTHCD IVTSFLLKKL QILEAPKVID LSPFENALDV LQVLVYIQND 180
181 DIIRICESCV P
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [331-747] |
1 11 21 31 41 51
| | | | | |
1 SLLHLQENTT LRSKVQDILL RIISVCGTKS LLRNLTNAKH LRIFCERLTK SQLAMFLPNL 60
61 LEIWVQQPPD KRLELLELVQ YALSNVDSDE IPSNVMLSVC TNLINEVASQ NKYSSTEISQ 120
121 ITTNREVEEE NEEILLVLLN IISSVIGRNA ELDLENPISS LLPALEQLSN YSNREISDLA 180
181 KDVYKTLIQS KDDYSLALSY TQSDLVPVRG QGVYMLRKLI EKKDDRINPV RVLHVLINLL 240
241 RDENSYVHLN VISAVVSLCD KYDDSLIRLL KEYTNTNKFT VDETLLIGQA IYQTMERQGE 300
301 LVAKFYGQIE QTCLSMLNNE NTDIKISSLN IARLLCQMTS SDAFIESAKN ILILEMGSDK 360
361 QFLRRAAVQL LDSCKHLPDS VITTLSYVGS HDKDDFIKES CLNILANQAD AAKYYLQ
|
| Detection Method: | |
| Confidence: | 61.0 |
| Match: | 2iaeA |
| Description: | No description for 2iaeA was found. |
