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View Structure Prediction Details

Protein: SPBC691.05c
Organism: Schizosaccharomyces pombe
Length: 668 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC691.05c.

Description E-value Query
Range
Subject
Range
gi|46136475, gi|... - gi|46136475|ref|XP_389929.1| hypothetical protein FG09753.1 [Gibberella zeae PH-1], gi|42553567|gb|E...
682.0 [0..6] [658..10]
gi|85105158 - gi|85105158|ref|XP_961901.1| hypothetical protein [Neurospora crassa OR74A]
gi|32417002, gi|... - gi|32417002|ref|XP_328979.1| hypothetical protein [Neurospora crassa], gi|28923485|gb|EAA32665.1| hy...
678.0 [0..2] [654..11]
gi|39952253, gi|... - gi|39952253|ref|XP_363843.1| hypothetical protein MG01769.4 [Magnaporthe grisea 70-15], gb|EAA56118....
666.0 [0..9] [657..15]
gi|109463292, gi... - gi|109463292|ref|XP_001066475.1| PREDICTED: similar to transmembrane protein 16A [Rattus norvegicus]...
640.0 [0..30] [649..244]
gi|40354210 - gi|40354210|ref|NP_060513.4| transmembrane protein 16A [Homo sapiens]
632.0 [0..30] [649..121]
gi|67524039, gi|... - gi|67524039|ref|XP_660081.1| hypothetical protein AN2477.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
631.0 [0..14] [657..116]
gi|110835696, gi... - gi|38614369|gb|AAH62959.1| Anoctamin 1, calcium activated chloride channel [Mus musculus], gi|148686...
628.0 [0..25] [649..114]
gi|68363662 - gi|68363662|ref|XP_688210.1| PREDICTED: similar to transmembrane protein 16E [Danio rerio]
620.0 [0..17] [635..88]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKLQSYEK QLTSDIVNNC DLIIEVNASS KTCQETLSSL LRELQLSHFS TAVRPGSDTS  60
   61 IFVFVKVQND YLIELAHNDR TSSFLCGALD DLNHVNVNSV TDIDSSERIR LVYDKITGSK 120
  121 TEDSLGICPG ENPYADIISI FPLHQPKFDI KWSKYWYQL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLGNKKQLDS INAEYGSQVA LYFAFADFFK TGVFVLSFWG ILGYYFLRPY SYIFAIGVAL  60
   61 WGAFFIQFWR VQEHKLTNHW STVNCQSLAK SMTEFKPQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [258-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYRVDSLLGT ARPYYPQWEI IVRSTIANVP LFLISGCILL FLIAIAFIVD VTLSEVYSGP  60
   61 LKSIVSLLPA VVFQVLTLPF TFIYSIVAER LTKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [352-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENRRTKTDFQ ASLSGKMFLQ NFMLSYTALF LISYIYGPFA EYFVPHYIQN RMSQSFFSVG  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [412-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIAKSTFKLN PLRLRNQYIY FLTNAQVINY ITILAVPQLI SYVKKHYMSK PTRELHIQDI  60
   61 PSETVTLKRA RSEAEKIEYD CYNDYKDFVL MFGFLVMFSP IYPLAPIFSL VNCVLYIRSS 120
  121 VYRFTKMVKK PVPCRVDSIA PWDQRLSLLS WLGCITMPSI CYFYSSTTKP SDKSMVIAAV 180
  181 IGLLSEHLWF LLRMFISSVF PVDKTFFAPA KERQHLLAER SFSIPPVADV PTSTTTAFEE 240
  241 ADETLSIYRT AENKKTK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 91.119186
Match: PF04547.3
Description: No description for PF04547.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle