Protein: | SPAC30C2.08 |
Organism: | Schizosaccharomyces pombe |
Length: | 457 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC30C2.08.
Description | E-value | Query Range |
Subject Range |
|
435.0 | [0..6] | [451..4] |
|
429.0 | [0..6] | [451..4] |
|
421.0 | [0..8] | [438..8] |
|
418.0 | [0..10] | [435..7] |
|
414.0 | [0..6] | [445..4] |
|
389.0 | [0..10] | [437..17] |
|
385.0 | [0..7] | [448..7] |
|
385.0 | [0..8] | [445..11] |
|
383.0 | [0..6] | [453..42] |
|
379.0 | [0..8] | [452..8] |
Region A: Residues: [1-326] |
1 11 21 31 41 51 | | | | | | 1 MMSYEPAEPV PVEEQPILEK LIGIRQRLAV LKRDRTRFIE KNEVFHLKDE LVEQMNLLDS 60 61 RRSTNSTRTI VDSQLEDCLH LLSLFYLAIG RNNDLPAFFV QLGTVRRLLE YNLEGACYTQ 120 121 NDLKPLKERL ERIRAAIVEG SKKEDASPVV VKYLNNKLAV CDRNYSEAQH NISKISPELI 180 181 GIQTRLVSIH RQIDGFAVRP TSDPGFIDRT MEQLKEIEEM KDSNGMFCDA DHVPLQGQEL 240 241 CNGILEECFS FLEDAKTKEG LSDEMKSSPK LQQIYHRLDE LLNKLKHLTL THRWTLRETD 300 301 LYVYRASLAE IDSMRIDGQF LDEQGN |
Detection Method: | ![]() |
Confidence: | 15.0 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [327-457] |
1 11 21 31 41 51 | | | | | | 1 APAGQRILLY LLRRCYAYIY QLLSSSEPVS EELMAVHNQL RTVKRCLLEV QRSGGICSER 60 61 DLYPYQMKLA SLENLRVNGK FLASDHSVPE GQELVNSLLT QCHQLIEELR DEKHQHDIEE 120 121 REGSENTDGN L |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.689 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.704 | a.25.1 | Ferritin-like |
View | Download | 0.688 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.745 | a.16.1 | S15/NS1 RNA-binding domain |
View | Download | 0.675 | a.48.1 | N-terminal domain of cbl (N-cbl) |