| Protein: | SPBC21B10.03c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 791 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC21B10.03c.
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..3] | [790..666] |
|
|
264.0 | [0..3] | [788..182] |
|
|
246.0 | [0..8] | [788..66] |
|
|
243.0 | [0..13] | [667..1368] |
|
|
225.0 | [0..56] | [667..760] |
|
|
214.0 | [0..102] | [777..61] |
|
|
213.0 | [0..79] | [772..126] |
|
|
212.0 | [0..79] | [772..64] |
|
|
212.0 | [0..79] | [772..186] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MATRSVSMKQ TSQRAASPNK TQGAKKWSAV AARGSKIAQS ATNDHRNVES IKVVPENRVR 60
61 GGVAAKATDS SSNVTSLASS EENVSSVSGS AK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.332 | d.93.1 | SH2 domain |
| View | Download | 0.475 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.448 | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.373 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.330 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
|
Region A: Residues: [93-234] |
1 11 21 31 41 51
| | | | | |
1 SNNSQQRVWK TDVAISAEKR TETRQRELRR WMPDPEDAGV PLAGLEESTD NVEWDQFATN 60
61 EKLFGVKSHF DEDLYTSRID RSHPKYKEKE QEADRIAKEI EGTVTNNIHI AEERGLKVDD 120
121 SGLDEEDLYS GVHRSIDVVR NY
|
| Detection Method: | |
| Confidence: | 43.148742 |
| Match: | PF06741.4 |
| Description: | No description for PF06741.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.204 | 0.051 | mRNA polyadenylation | a.22.1 | Histone-fold |
|
Region A: Residues: [235-431] |
1 11 21 31 41 51
| | | | | |
1 TRSNAYNKNN KDQKPKNHEA PHQHPQQKVV PPDDPAIVSH RHLALPRAPG PDSRAAERFF 60
61 NARRKAGPLS RREKEGQIKE FMQFSQSLKI GSLDSKQPSS TKSVAEVKVA DEKQLPDASS 120
121 QATPADSKEP RKEEAEKPVT SATEVSSEKV EKVDGNTSSP SKEEEKPSTE PEKPSVVTQR 180
181 KETTGTKLGT KLNAKAI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [432-653] |
1 11 21 31 41 51
| | | | | |
1 SFKPNVAAPV FTPGKFTIPS KPAPVNASRP MMPQQSNNSE ASIPSTTPQS PSVVSNGENK 60
61 PSSSPVFFNG PVSSEKEPIL DNFNVFKNVG EEHQGAEQID KPFSCPPTWN TGPNSLQQTI 120
121 ANSRPEGNSG SAKKAAAANP MIPSIVLPNS AMPSAMPMYP TPTMPYIPVG YPVPGYTPYM 180
181 RNPSQHTSVA PSPNGTPTSG NSSTVGSPMI GYMAPQFIPP YA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [654-791] |
1 11 21 31 41 51
| | | | | |
1 MPQFPPSGNG RGASAPATYF VPQMGGMMAY TMNGVPPMYG QYAPNNGMMN MHYPMYGDSR 60
61 RSNSQRSFNS SNGKRSNVHK NNNASNTFSH SNASTSSSLN AAPNTTAKSS SQTAPPVSKG 120
121 DATEKTEKDA SANQEAKP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.325 | 0.380 | mRNA polyadenylation | b.6.1 | Cupredoxins |
| View | Download | 0.506 | 0.084 | mRNA polyadenylation | a.156.1 | S13-like H2TH domain |
| View | Download | 0.221 | 0.064 | mRNA polyadenylation | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
