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View Structure Prediction Details

Protein: CE01191
Organism: Caenorhabditis elegans
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01191.

Description E-value Query
Range
Subject
Range
gi|157775093 - gi|157775093|ref|XP_001665612.1| hypothetical protein CBG17959 [Caenorhabditis briggsae AF16]
gi|39591530, gi|... - gi|39591530|emb|CAE71106.1| Hypothetical protein CBG17959 [Caenorhabditis briggsae], gi|187025025|em...
213.0 [0..1] [265..1]
gi|220942804 - gi|220942804|gb|ACL83945.1| CG11007-PA [synthetic construct]
FBpp0311843, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG11007 (CG11007, FBgn0034455). It is a prote...
184.0 [0..5] [263..3]
TMX2_MOUSE - Thioredoxin-related transmembrane protein 2 OS=Mus musculus GN=Tmx2 PE=1 SV=1
182.0 [0..3] [264..14]
gi|119114234, gi... - gi|119114234|ref|XP_319140.3| AGAP009997-PA [Anopheles gambiae str. PEST], gi|116118319|gb|EAA13899....
AGAP009997-PA - Thioredoxin domain-containing protein 14 homolog precursor|protein_coding|3R:47430060:47430884:1|gen...
181.0 [0..6] [265..4]
TMX2_RAT - Thioredoxin-related transmembrane protein 2 OS=Rattus norvegicus GN=Tmx2 PE=2 SV=1
180.0 [0..3] [264..14]
TMX2_PONAB - Thioredoxin-related transmembrane protein 2 OS=Pongo abelii GN=TMX2 PE=2 SV=1
gi|55725645 - gi|55725645|emb|CAH89604.1| hypothetical protein [Pongo abelii]
177.0 [0..3] [265..14]
gi|114642392, gi... - gi|114642396|ref|XP_001144458.1| PREDICTED: thioredoxin-related transmembrane protein 2 isoform 5 [P...
176.0 [0..3] [254..14]
TMX2 - thioredoxin-related transmembrane protein 2
175.0 [0..3] [254..14]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIPRLDEVR RALTAFHFFN TLLALAFPVI RSTSLCDYVF AVEGNEQCEI DSREREILMF  60
   61 LLIILAWKGR KATNWMHYVN NIFLFSKIAG MFLFIRADIL PGIIYILACL IVTVLFPEPV 120
  121 YNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEQVTYFQGE QLFEELTRNR NTIWVIQFFT TWSPECRHTS PVFAELSQKF TLPNMKFGKL  60
   61 DIGRWAKEGE RFRVNAHPMS RQLPTICVFK DAKEIARRPL VNDSRRAVPF VFSEENCVLA 120
  121 FDLLNLYNEQ KEKKGAKAKK ED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.154902
Match: 2dj0A
Description: No description for 2dj0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle