Protein: | sra-2 |
Organism: | Caenorhabditis elegans |
Length: | 329 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-2.
Description | E-value | Query Range |
Subject Range |
|
202.0 | [0..3] | [323..353] |
Region A: Residues: [1-329] |
1 11 21 31 41 51 | | | | | | 1 MSNSSCADED LIIRFDSLNQ KAAQFVYLLA IILTFITTYF AVKILFTQSF FEISTKILLV 60 61 QNLFYANLYQ FFHGIEAVRM LYKSFFMIND PCNFMEPEIE CVFYYKIILM GSSGMVYGQT 120 121 GLLIERLCAT FSKDYKKKQS AIKCAVISIL VLICSSSTGR LIVWDDPIDK YNFACYIPPK 180 181 ESYIRANHYF TMCAVLSTIN FCISTFILKY NKRCEYQTRF KVGARFQKQE LIESTKAICF 240 241 LTVSQFVAVF LNSFGMIVLV YIQESISHRI FNLLVVWLYA FPIVVLMFPV ILVHQIRSSR 300 301 WRRALKIKVI KNEKQTQDDH MKHMKNMWI |
Detection Method: | |
Confidence: | 44.09691 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |