Protein: | sra-29 |
Organism: | Caenorhabditis elegans |
Length: | 348 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-29.
Description | E-value | Query Range |
Subject Range |
|
196.0 | [0..5] | [316..353] |
Region A: Residues: [1-348] |
1 11 21 31 41 51 | | | | | | 1 MENLNPACAS EDVKNALTSP IMMLSHGFIL MIIVVSFITT ALAVQTLWYK NVFPFCTKNL 60 61 LLSAIVNGIF HQSTVAEIRL KTVYHLIRYS NAPCSILFQS SDCFYDNFLY YQTALFSSFY 120 121 CVSLFLDRLF SLNPRSFYNS HQTLGFIVFL ILQIICPIAI QFWTFHDSDY TSYVPMCNYP 180 181 PASSVSGTKF YFINDSRIII MGTIFMCSLF LYIHNKSREK RMIFNVYNTD SRYKSYENFL 240 241 ATRAVCIIIF SQITCLGITS FVPSIFNQFR QSISPDWFHL ILAFMAGATY SNFFLPLIVI 300 301 YETQLIIAHR HKLIKKLKSQ KEEFSDHFAS LDFVWEREAN KKKTQLVQ |
Detection Method: | ![]() |
Confidence: | 49.39794 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB):![]() |