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View Structure Prediction Details

Protein: CE02750
Organism: Caenorhabditis elegans
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02750.

Description E-value Query
Range
Subject
Range
gi|49527412 - gi|49527412|emb|CAG61052.1| unnamed protein product [Candida glabrata]
gi|50291337, gi|... - gi|50291337|ref|XP_448101.1| unnamed protein product [Candida glabrata], gi|49527412|emb|CAG61052.1|...
333.0 [0..2] [487..112]

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Predicted Domain #1
Region A:
Residues: [1-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLNWKLLI LSAVLAITAI FQMGYTNAYP NTAIGSFRIF LNESANEPYT LSNSEFEWAW  60
   61 SAMLAIYFIG FAAGSVISAG VADRIGRKWT LFLGTCGSLL SSLIALFAII LKMPLMFGFS 120
  121 RLVMSLSAAI SMNGLILLFQ ESSPSHMRGL ISFNAEMAFV ITNLIGGLFG MQSILGQNIV 180
  181 GLIAVSIIPS SVACFLTVFL KESPKYLFLK KHDATEAGRA LQFYQNIKDE EEKMNVLNDL 240
  241 KLEKEEMGHQ KNGSLFDIMA NQPVRRGFLL GLATMQLTAS VWPVVFYSTD FLMDAGFSYE 300
  301 LSESVSTGML FLSSLSTIVG MFIVEKYSRK WLLIGTASVN IAAILVFSLS AILSHYWTWI 360
  361 GYGCIICLIL HGISYSVAMG PIAWFITSEL VPINFRAASQ SLVLALNHTV ALVLAFLTFP 420
  421 LYKTIGPITL VIFFVIPGIL CIIMLILYLP ETKDKHINVI VEQLRETKAK RKESQKLETE 480
  481 ESIGMNKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 4.09176719149278 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.54194478414824 bayes_pls_golite062009
hexose phosphate transmembrane transporter activity 3.29248638217469 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 3.29248638217469 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.99050613058546 bayes_pls_golite062009
cation:sugar symporter activity 2.99050613058546 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 2.62141276633776 bayes_pls_golite062009
sugar transmembrane transporter activity 2.47557586092261 bayes_pls_golite062009
ion transmembrane transporter activity 2.21266150105753 bayes_pls_golite062009
solute:hydrogen symporter activity 2.10485633822652 bayes_pls_golite062009
binding 1.89539096965643 bayes_pls_golite062009
cation transmembrane transporter activity 1.79369588808394 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 1.6904339767429 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009

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