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View Structure Prediction Details

Protein: CE03052
Organism: Caenorhabditis elegans
Length: 599 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03052.

Description E-value Query
Range
Subject
Range
gi|50754333 - gi|50754333|ref|XP_414335.1| PREDICTED: similar to choline dehydrogenase precursor [Gallus gallus]
576.0 [0..25] [596..45]

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Predicted Domain #1
Region A:
Residues: [1-599]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQNHAARSL QRTSKRWINW RDSMKEGTFS ADIAENKPTH IIVGAGSAGC VLANRLTEDP  60
   61 SNRVLLIEAG PVDHKWDWRI HMPAALMYNL CSDTYNWHYH TTAQKNLGNR VFYWPRGRVW 120
  121 GGSSTLNAMC YVRGHAYDYN RWEKEGASGW NYANCLPYFK KAETYSDATG PNDPYRGNNG 180
  181 PLYVKKGDAE NPLHKAWLNV GKEHPLGWTN DMNGEKQEGI STMDMTIHNG ERWSASKAYV 240
  241 HPIRNRPNLI TSSGITCTRV LFDTNKAIGI EFIRKLNFVG TDSIDSYSRE KIYCQGDVIL 300
  301 AGGAINTPQL LMLSGVGPAD HLRSHEIPIV ANLPGVGQNL QDHLEIYVQQ ESTQPVTLYN 360
  361 KSSWKFPHNM IKIGLEWFTN RTGLGASSHL ETGGFARSDD TVTHPDIQFH FLPSTVHDDG 420
  421 RTNGTCHGYQ VHVGPMRSQS KGYIMLQAKD PRRAPIINPN YMEEDSDWRE FRKCIRVSRE 480
  481 LFASKAFDEF RGKELAPGPD CQSDADIDRF VKEKAASAYH PSCTCKMGSE NDKMAVVNPE 540
  541 TMGVYGTENL KVVDASVMPS IVSGNLNAPV IMMAERAADL IKHKKQLLPP SDANVWHHN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.69897
Match: 1gpeA
Description: Glucose oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
choline dehydrogenase activity 4.66965094791663 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 4.10319574017291 bayes_pls_golite062009
oxidoreductase activity 2.3417445147889 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 1.47575323060551 bayes_pls_golite062009
oxygen-dependent protoporphyrinogen oxidase activity 1.34149762265767 bayes_pls_golite062009
glucose dehydrogenase activity 1.30840878956762 bayes_pls_golite062009
transporter activity 1.29839290134235 bayes_pls_golite062009
transmembrane transporter activity 1.07862908893913 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
monooxygenase activity 0.72374980280274 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.704326257168965 bayes_pls_golite062009
binding 0.694618787489897 bayes_pls_golite062009
substrate-specific transporter activity 0.556967966402473 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors 0.442625746935807 bayes_pls_golite062009
protein binding 0.370064403093958 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.31459693204333 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.242456601435627 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.170082356807927 bayes_pls_golite062009

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