| Protein: | CE04352 |
| Organism: | Caenorhabditis elegans |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04352.
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..22] | [445..1024] |
|
Region A: Residues: [1-445] |
1 11 21 31 41 51
| | | | | |
1 MTAIGPVDKK AVMKLLIPAL ICNMLAFTSI LPLFPTILNY YSKEGHRDWL YDISVKGLQS 60
61 FQEAIGVPHS ERYDKVFFGG FLGSLFSALQ FISSPTLGSL SDIYGRRAVI SLCCIMTFIS 120
121 YVNWLKADIF AYFVLSRILG GLSKGNINVA TAIVSDVYSP EDHPKGMALI GISYSLGFLI 180
181 GPMIGAYFST IASIDSPFAY PAMFSIILTI LEFGFLFFLP ETLDLKEQKS LDDIKKTRKE 240
241 LVTPKDLFQF TAVNAPQERK QEMQKVGWIY FLFLFLYSGL EFTLPFLTHI RFDFDNMQQG 300
301 KVYLFTGLLM LPIQAKYVRK TPIEKQKAVA EFGIACIIPA YLLVAVAKTP LVLYAGLFFY 360
361 AIASATVVTS LTSLVHVIYP QSEKGVLAGI FRSLGCLARA LGPVISSTFF WLLGATTCYI 420
421 MGAFLLFIPL ILLKRLENPA AKKTV
|
| Detection Method: |  |
| Confidence: | 33.154902 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.805286077372817 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
