YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE04505
Organism: Caenorhabditis elegans
Length: 79 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04505.

Description E-value Query
Range
Subject
Range
gi|39587515, gi|... - gi|39587515|emb|CAE58453.1| Hypothetical protein CBG01590 [Caenorhabditis briggsae], gi|187038099|em...
gi|157757943 - gi|157757943|ref|XP_001671315.1| Hypothetical protein CBG01590 [Caenorhabditis briggsae AF16]
107.0 [0..1] [79..1]

Back

Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMHIKQSTV RSMLIVARRG KKRLNLDPDA LAVLTALINL LAQESVARAA QSAANTGSRH  60
   61 VTKEHLKRVI AQLMLDFAI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.99
Match: 1id3C
Description: Histone H2A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle