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View Structure Prediction Details

Protein: inx-7
Organism: Caenorhabditis elegans
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-7.

Description E-value Query
Range
Subject
Range
gi|39593213, gi|... - gi|39593213|emb|CAE64682.1| Hypothetical protein CBG09460 [Caenorhabditis briggsae], gi|187031833|em...
gi|157763564 - gi|157763564|ref|XP_001674124.1| Hypothetical protein CBG09460 [Caenorhabditis briggsae AF16]
522.0 [0..1] [556..1]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVFRVLNTV PYTNRTGAKD LVASIHSFLT SNLLVGLAVL ISWKQFGGTP IECMVPLDFT  60
   61 SAWVQYSNNY CWAQPTYFIP FTEELVEQVV DPADVVADGI TIGNGGNRPR FVKKGGEKIS 120
  121 YYQWMSFFLL FEAACFRLPC FIWKYFA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [148-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQSGMQVGEI LRVASDENNA VPLVKKANID ALCIHLRGVL RFQKRLKLKK IVPHKILRFL  60
   61 NIKYSAYYVT FIYFVAKVAF LLNVILQSKL LNKYMLPHDR QQNFGFDMWK TIFYGSTNGN 120
  121 ETWRENGVFP RVTLCDFETR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [288-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMGNVQMHTV QCVLLLNLFT EKIFVFLWAW YILLTAFTVG NLFSWLFAVF NETYNEHFIL  60
   61 NHLEMCETPF DKDDLKNREH VTRFITLYLG TDGLFLLQLI AQHADVVFTT ELIAALFKTY 120
  121 IE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [410-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEAQRATLKQ MNAVLPLLRP NDESQVESGK NTAPSTSHNV RRRGTEQLEK NVKSRQGSLS  60
   61 TQLRPFNSFE EPDQPTKKFD DSSSEDENSK KGSKKPSPTK KKASSKNSPQ SSSNSRRPSL 120
  121 AHTASPAFTH HHEPDSKIPK TAEKKHW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.94
Match: 2fj7I
Description: No description for 2fj7I was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle