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View Structure Prediction Details

Protein: gi|25375356
Organism: Caenorhabditis elegans
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25375356.

Description E-value Query
Range
Subject
Range
CE28171 - status:Confirmed UniProt:Q23403 protein_id:AAB93425.2
316.0 [0..1] [188..1]
gi|187022627, gi... - gi|39581954|emb|CAE73816.1| Hypothetical protein CBG21369 [Caenorhabditis briggsae], gi|187022627|em...
290.0 [0..3] [177..13]
gi|45198581, gi|... - gi|45198581|ref|NP_985610.1| AFR063Wp [Ashbya gossypii ATCC 10895], gi|44984532|gb|AAS53434.1| AFR06...
gi|44984532 - gi|44984532|gb|AAS53434.1| AFR063Wp [Ashbya gossypii ATCC 10895]
46.0 [0..38] [97..5]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLTKKTEE EIRRDFFGPV QEAACKPYLL DVDPRKSWCE LSELRLSTLI CEFKPIGINK  60
   61 HFHLIGIIER MGKVFDNENA QVEIFLSEEN RVAFRNQQRD LLMGGRPERT SYPPKYLCRP 120
  121 SLEMIEDKLK KWFGLRFCEE NESYPSEFNS VTDYELPEYI MAEVREIREQ KEKETQTTGS 180
  181 SSRKRRVPSP ED

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.356547
Match: PF07904.4
Description: No description for PF07904.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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