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View Structure Prediction Details

Protein: CE05732
Organism: Caenorhabditis elegans
Length: 755 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05732.

Description E-value Query
Range
Subject
Range
gi|187038615, gi... - gi|39589209|emb|CAE57942.1| Hypothetical protein CBG00997 [Caenorhabditis briggsae], gi|187038615|em...
gi|157748873 - gi|157748873|ref|XP_001678150.1| Hypothetical protein CBG00997 [Caenorhabditis briggsae AF16]
466.0 [0..1] [729..1]

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Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRKIRNPY HGIDDLQSDF GDEPSSSSKP KRKGDFLNKD YSSEILKKRK TDGRGGFEEE  60
   61 HGRMHRRMAK MMSMNAYDRH KEMINLYYLS YPGATKLLNR KIQDETTDLD VLKKHHRFVW 120
  121 SEDDEINASQ PDKNSWETRM AKKYYDKLFK EYCIVDLSMY KTNKIGMRWR TENEVKEGKG 180
  181 QLSCGARKCN ETAHLSSWEV NFTYKEDNRV KSTLVKARLC PKCSEKLNYG TRKRQVVQKK 240
  241 RAVRKWEKER KRTKKDEEED DDVELNQHEA KNQETKVQPS TSTLSASTDI WEGPPPAETE 300
  301 KTVDDEIDEF LDDLFLKKMN K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [322-755]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLIFIMLVTF LAIEKSFMSE VDNMKLEFVQ TIWRHGDRSA LEGLFPISEK NWTFGGGGLG  60
   61 ELTPMGMSEM NNLGTIFRRR YVEDQQFLSH RYAAKEIYIR STNLNRTIIS AMSLLYGMFP 120
  121 PGAWNIQGVD YPNDVDWQQG FTFIPVHVDG IDQCAVAQLC NCRRFQELQE KWAELDEVKN 180
  181 ATVAMIALNR RVAAFYNVTD QPEKFNRYTD AWKCQRNWFN DTMYQQLPWY NEDLYNEAQR 240
  241 TYAPFKRFTE GNFGNPKPSI VDGIDIPQEV STLQGGPLLN EIFERGREKI RCVADAENCS 300
  301 IDYLKPLKFY AYSSHDQLVY ALLVTLGITD VVKTVDGWPD TSSSLTIEYY SNPGNQSSVK 360
  361 FLYRDNSNDN FSDVTSQIPV CNGAQYCAMS DFQNIAYQFK PLPDYMTLCE TSLSSISSVL 420
  421 NNKIWVFVII YFLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.522879
Match: 1nd5A
Description: Prostatic acid phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphatase activity 5.40518425721991 bayes_pls_golite062009
phosphoric ester hydrolase activity 5.19464980606549 bayes_pls_golite062009
hydrolase activity 4.39782325890382 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 4.32643444525143 bayes_pls_golite062009
catalytic activity 1.37714494241232 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.35665111303981 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.01761355562415 bayes_pls_golite062009
binding 0.926914834433224 bayes_pls_golite062009
kinase activity 0.891791120150528 bayes_pls_golite062009
acid phosphatase activity 0.857905032933568 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.57794482374484 bayes_pls_golite062009
protein binding 0.259674156092283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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