| Protein: | CE05985 |
| Organism: | Caenorhabditis elegans |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05985.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..7] | [358..1] |
|
Region A: Residues: [1-396] |
1 11 21 31 41 51
| | | | | |
1 MSTISPDIVT NSTEEVAECS RNETYDFNRY ALIVYVGTPI AVAGVICNWI LFRLFTKSKS 60
61 TKSPALYLLL LAVLDLLMDL LYIPFFTVDA LAIYHKNEFL YHIWHDYAMF VFGLSRLVQF 120
121 ASTYIILCAT IERFIVVAEI NSLDFLISST GRFVTIGITF LGVAILRLPA FFEYFITYRP 180
181 DCPLYENYDY TPILASWEHY QMFNFYVMTV LHIFVPFALL LMLNISIVVV TKRKLTGIGW 240
241 AVTTFIDMPK VSEMIRKESI NSNKRRRDEL RYATWTMVSI ATTYLCCSSL SLFIGILENV 300
301 WPENTLLFQE DGSSTKFYTF ASDAVSILVA VNSLLRIVVY SLCSPNFRKQ LVKEYPCLKC 360
361 LTCGSDGDEK AKKIKEEKKL FIGYQNLIMG ARVDML
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
