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View Structure Prediction Details

Protein: CE06453
Organism: Caenorhabditis elegans
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06453.

Description E-value Query
Range
Subject
Range
PIGS_RAT - GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3
559.0 [0..44] [538..15]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQESSKSFK QKALDFLLGR QTETEEYGEI TQSFINYVHS ERPYKLAASL SFVILVFFIG  60
   61 MPMWHFTTST YRSNFPTFPS NQSITVPIRV IFVITSEDLR NDVKTLMNEL EVNMTKKEVV 120
  121 APLDFTWTTQ FIGLRSFEHL EQDHSIQIEE NKEFFDVFVA LVPEKEWTHY SATRIQLGIG 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KWNFIQWPTK SEEKQKASTR VTDLVSETLI DVPHLNSIVR RDLRQKMQPW QIAALPLSHQ  60
   61 KRLVWDSAPL ATNYHIQVIH LHENSEITPE SLKEQEKTAR ALRKFAEKVK EITNVEVSFE 120
  121 HLWDFEPTRG FLIKDVQERW ALTHSAMEEL VKKVDSQLQT SLQHGAVLRF VVLETVEPVI 180
  181 VLDDTGEDSH GVAVASWGAV LPRNEATESR AIAAIRIQMG MDAELSHGWH RPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [414-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAICQWEVAR ARLRASVDNA MRAASAVRAL DQLAQKISNI VINDDVADRA TRAVEILNDV  60
   61 VRPGRMLDFE RLLEARRLAD SANSDHSLLA MLYFPMDQRT AVLIPLAVPI VLPICKLVYE 120
  121 IAKITVFWGY L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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