| Protein: | CE06696 |
| Organism: | Caenorhabditis elegans |
| Length: | 369 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06696.
| Description | E-value | Query Range |
Subject Range |
|
|
201.0 | [0..44] | [363..518] |
|
Region A: Residues: [1-369] |
1 11 21 31 41 51
| | | | | |
1 MRAFCIILLV GFTQVNALFG DRLLRARNPK TGPCTLNDDG LKCNENGYYE TVQCNSESCY 60
61 CVTPHTALVA YDTRTNNPKT APKCGTCLVY LQKLFADGDP PENSFVPKCD VGKGDFEPVQ 120
121 CDSKKNQCYC VDTNTGREIQ GTRKPLSNTT KMNCMQIDFS IDSSAFPAFE KPDPAKPKND 180
181 QPIGKPWCAS NRNAGHTCNQ NKTSIRYWFD VETFQCFPFE HKGCGGNQNS YRTSSECYFD 240
241 CVLQDYFSCA MQSQPARKSN GQWYSCPEGP DGPPGFKTTT TPGPKLTSDG CPKGYICSMG 300
301 AFFGICCEEN LTNRYQAAFK PLCKNKKEAL QTKQDDWSSA MLGKSCSDRF CPSSHTCEHN 360
361 EFFAYCCPR
|
| Detection Method: |  |
| Confidence: | 7.154902 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
