| Protein: | scrm-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 301 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scrm-8.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [281..8] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MNIQPGQLPL KAISLTSAVK SPEEVEQDSK KDEPRAEGAG FGRRNNAGTK LPAARSTPMK 60
61 IPNQVAAMPV QMTGFVQLAS NNILSAIAHT NSLMVVQCIE PLEIFTGFET PNRYVVHDMY 120
121 CRPLLYCMER SNVFARQYHG NNRNFGMQIM DTHGAQVMTC FRGRPCCSCD DFLSTQFLDQ 180
181 QIGMMKRECC NPNFELIGSG CNQPLLIQSP VCAGCGGTQK FPVMTYNGAL VGEIVRLYPG 240
241 FMQEMFTDAD TYIVHFPMDM PPILKLLLVT SVFLIDFTYF EDRNQDRHHH GGMHGGMHSS 300
301 F
|
| Detection Method: |  |
| Confidence: | 3.13 |
| Match: | 1zxuA |
| Description: | X-ray structure of protein from arabidopsis thaliana AT5G01750 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.20555655112374 | bayes_pls_golite062009 |
| receptor activity | 1.15270506651032 | bayes_pls_golite062009 |
| binding | 1.05855974212836 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 0.94252200727689 | bayes_pls_golite062009 |
| protein binding | 0.6155304260359 | bayes_pls_golite062009 |
| photoreceptor activity | 0.504277760871571 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.450513229504489 | bayes_pls_golite062009 |
