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View Structure Prediction Details

Protein: fbxc-32
Organism: Caenorhabditis elegans
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxc-32.

Description E-value Query
Range
Subject
Range
fbxc-33 - status:Partially_confirmed UniProt:O16768 protein_id:AAB66238.1
314.0 [0..6] [409..3]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSLPLTYP SLKCVIKHME VNSRIQLSQR CPSIRKAEKS IPLKIGHLEL DQCRVKINNT  60
   61 DYSLAVVCNY FSSPYDLDEV GSMDLGEVID EQRDVVVDNR SLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [104-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGEKRILRME YELRMLTDDW EKKNALIGEA LKKELKMTTE KSELVNRKCY VGIIKSLFLS  60
   61 RRVGVPAPIW DIDFVNKNKL ITFRDEKLSY NMKLHQAFKY LIFKLFSGRR DAIQVKKLSI 120
  121 ENKGILRVPA SLNLKVTHLE ILGSGVDKIA ISFQPLLEGS SLQSIKLNND FNIENPILQT 180
  181 SPLLIFKNPN ENLFRARSAF TNVRVELEKS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [314-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIFPREALDL IANWLRHGKE VGTIWNFSLT EVTALVCFKD IRKLPGAKYA GHKTSSQLGR  60
   61 SVLIPINAFS EIHIFDEKEE AQDGNDWSLK ITVRRKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle