| Protein: | srab-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srab-10.
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..3] | [305..363] |
|
Region A: Residues: [1-320] |
1 11 21 31 41 51
| | | | | |
1 MEKLSTSSFL QFTLLLNLIA GAIAFVLTIA ASYALWKSRV TKLFHINVII IFQVHLAGFF 60
61 IHCFNRIILH ASDLYRYTLL DYCDMPSSTT RCFAFRIQYV YGLWLVGATT VPLVIERYIA 120
121 TIKSSSYEHI GYRLGIYLAL LQVTIAFICT FIAFHEFSFD EPTMSYCIGV KFGEFNNAEI 180
181 VSLVNLVVQI IARICFQFLF KQNEKLRSEQ LTSTLSTRYS LEQNLKSIEI LKCFANLQCA 240
241 FMIVHMVLFV YILQSDADFE QSTYIALVEL NSPHPFYAIV SILAFFRTVH SSEVKLKKNL 300
301 QNHVNADQNV YFENFNKILQ
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 1.40205587023688 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40205587023688 | bayes_pls_golite062009 |
| receptor activity | 1.39249706683393 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.04604785247703 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.016863453778 | bayes_pls_golite062009 |
| binding | 0.101461761820711 | bayes_pls_golite062009 |
