| Protein: | sra-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-18.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..28] | [329..46] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MNKTAEELDS RNCASESLTN ALISITMKFN FIFIITVVLI SYCFTWLAIQ ALWKHNIFSN 60
61 STRLILIVCL LNSVVHQTTM LETRITQAYR SVVYDSEPCK LLFRSSDCVF ELYLYYPTGY 120
121 FSTYSVFSLT FDRLISHYKS RYYHMHQYFI ATSLLVLQLL LTMFSFYIVF YGVSLAGYVP 180
181 MCNFRPELTV YYGAINNVRT GVMVSCIIVT MFVYYVCVKS EKQIQKCSYS PGERYSAYEN 240
241 VTTSQSICIS IVLQFSCIMI SSFGSNLLIH ITSKTTVSEE VFYAIVSFLP GVTYANLCLP 300
301 LVIYFKTKLT TRNRKNRIAV MTSMYGDAGE HIDRLKRSWE
|
| Detection Method: |  |
| Confidence: | 45.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
