| Protein: | sra-21 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-21.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..11] | [319..353] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MSQLTAEELD SQKCASEGLT SVLTSITMKF NFLFITTVIL LSYCFTWLAI RALWKNNIFS 60
61 NSTRLILIAC LLNSVVHQTT MLESRMRQTY RSFVFASEPC NLLYRSSDCV FELHSYYLTG 120
121 YFSTYSVCSL AFDRLVSHYK SKFYHTHQYF IAVSLLVLQL LLTLVSFYIA YYGVHLAGYV 180
181 PVCIHYPRLA VHYSTVNTVR TVVMVCCLVV TGFIYYLSVK SEKQIQKSSY SPGKRYTAYE 240
241 NVTTSQSVCI LIVLKLFCNM LSSIGINLLL LMGEVVSEGT FVLVALFLPG VTYANLCLPL 300
301 VIYFKTKLII RNRKFRIAVM TSMYGDAGEH IDRLKKSWE
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
