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View Structure Prediction Details

Protein: CE10638
Organism: Caenorhabditis elegans
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10638.

Description E-value Query
Range
Subject
Range
gi|157765186 - gi|157765186|ref|XP_001674936.1| Hypothetical protein CBG04646 [Caenorhabditis briggsae AF16]
gi|187035428, gi... - gi|39589926|emb|CAE60924.1| Hypothetical protein CBG04646 [Caenorhabditis briggsae], gi|187035428|em...
401.0 [0..1] [245..35]
CE10636 - status:Confirmed UniProt:Q20519 protein_id:CAB01194.1
397.0 [0..1] [248..37]
gi|91077864 - gi|91077864|ref|XP_972466.1| PREDICTED: similar to glutaredoxin, grx [Tribolium castaneum]
54.0 [0..164] [226..122]
gi|47218760 - gi|47218760|emb|CAG02746.1| unnamed protein product [Tetraodon nigroviridis]
50.0 [0..164] [226..183]
gi|115637269, gi... - gi|115942350|ref|XP_001192695.1| PREDICTED: similar to LOC496161 protein [Strongylocentrotus purpura...
48.0 [0..168] [226..139]
gi|50306071, gi|... - gi|50306071|ref|XP_452997.1| unnamed protein product [Kluyveromyces lactis], gi|49642130|emb|CAH0184...
gi|49642130 - gi|49642130|emb|CAH01848.1| KLLA0C17842p [Kluyveromyces lactis]
47.0 [0..168] [245..176]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQLRVQFLH FQSIFYHQNK AKIEHEKKSL NVIIIVVQNQ IDDIKLIVGE YFKIKNLQML  60
   61 KTIIDSFEYT LNKIAFEISK AKGQNFFIEK VEKLINNLNP FDVPIYENIQ GVVLELNTQV 120
  121 SSMGNIPEKL EIKTQRETFQ LEEENEIRMD 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NCRMMSGQAK IYKIFRKSVV LFVNYLEDEQ TLSTIQSLND NQIEYTIFDV STDSEIRFIS  60
   61 KALSDCETFP QLFVDGAFEP LPILKNLLPK LPKVYTMN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 1wikA
Description: Solution Structure of the PICOT homology 2 domain of the mouse PKC-interacting cousin of thioredoxin protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle