| Protein: | sra-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-23.
| Description | E-value | Query Range |
Subject Range |
|
|
182.0 | [0..11] | [319..353] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MNKTAEELLD SLKCASDGLA SALTSVTLKF NCAFISTIVL ISYCFSWLAI QALWNNNIFS 60
61 NSTRLILIVC LLNSVVHQTT VMETRITQIY RSIVFASEPC EILFRSSECE IELYFYYLTN 120
121 YFSTYSVFSL TFDRLISHYK SKYYHMHQYF IAISLLVLQF LLAILSFYIA YHGVPLAGYV 180
181 PMCNYYPKMA VHHITINDVR TVVMVSCIIV TGFAYYLSVK SEKQIQKCSY SPGERYSAYE 240
241 NVTTSQSVCI LIVLQFSCTM ISSFGVNLLL MMQEAVSEET FTKVGAFLPG VAYANLCLPL 300
301 AIYFKTKLTI QNRKLRIAVM ISMYGDVGEH IARLKKSWEY
|
| Detection Method: |  |
| Confidence: | 41.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
