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View Structure Prediction Details

Protein: CE13974
Organism: Caenorhabditis elegans
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13974.

Description E-value Query
Range
Subject
Range
gi|67903516, gi|... - gi|67903516|ref|XP_682014.1| hypothetical protein AN8745.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
264.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPACILTYFP AYCLDFSHTN SDKKEKFSLS FGSHGLYKQA LIVLLIGFLC LASLCSNYLI  60
   61 INFTFICMKH DLSDGFTEIN GTKYSIYDYT SKDKTWIIWS VAAGTIIGTI PLNMMYVKYG 120
  121 ARIPFLIAGL VSCIATALIP LSAQWNFFFL IFLRFVQGFC YSADFAAIGL MTVRWAPLSE 180
  181 TALFVAVLTC FNGIASTFTN FATGLICESS LGWKWAYYVH AIVGFVLFGL WLLVYIDHPQ 240
  241 ETKRVSRKEL QKIQKNKSEA HLSKKCDVPY MKLVTSPVIL CVWANAFFEL TAAIMFSTYI 300
  301 PLYLHEVLKF GVTETGFYAS LILGISLPVR FVFALISDKL KFVSEIFKIH TFNTISVGLS 360
  361 GLFFACIGQF SHVVITAIQW MKCLALFVAP ALVSIFVHEE SNRLQWIWVF LIVGGLMIIT 420
  421 NIVAFFILTD KPASWTGSLE SEESLEKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle