| Protein: | csc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 249 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for csc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..1] | [249..1] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MPPRKIKKDP AVVAMADTLE TRVKDLLEEY KKKLREVALQ TAKAESDRII ATIKPKYRDM 60
61 PIMEFLASPP DDFYIESGEE EEEGEAAVAV KQELPSEPDM EIDDAAAAQK TSIPIGQNSG 120
121 RN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.477 | a.118.8 | TPR-like |
| View | Download | 0.470 | a.186.1 | Description not found. |
| View | Download | 0.469 | d.52.8 | Description not found. |
| View | Download | 0.366 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.348 | a.29.6 | Description not found. |
| View | Download | 0.343 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.299 | a.118.1 | ARM repeat |
| View | Download | 0.258 | a.47.2 | t-snare proteins |
| View | Download | 0.251 | a.74.1 | Cyclin-like |
| View | Download | 0.248 | a.1.1 | Globin-like |
|
Region A: Residues: [123-249] |
1 11 21 31 41 51
| | | | | |
1 TVQVKQEPEI DDDAAHETSI PIAPSGQNSG RNTAADEHRR NEIITPAGQV LPLPTLQPEK 60
61 PFRAPHVDEE IAFSVNGSPL VLAGRTTATA AGKENRKKSK KSGAASKKAA AAAGPLQPET 120
121 ENAGTSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.442 | d.95.2 | Homing endonucleases |
| View | Download | 0.398 | a.196.1 | Description not found. |
| View | Download | 0.328 | d.95.2 | Homing endonucleases |
| View | Download | 0.326 | d.95.2 | Homing endonucleases |
| View | Download | 0.306 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.300 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.284 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.243 | d.95.2 | Homing endonucleases |
