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View Structure Prediction Details

Protein: CE14968
Organism: Caenorhabditis elegans
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14968.

Description E-value Query
Range
Subject
Range
PICK1-PA - The gene PICK1 is referred to in FlyBase by the symbol Dmel\PICK1 (CG6167, FBgn0032447). It is a pro...
gi|220957282 - gi|220957282|gb|ACL91184.1| PICK1-PA [synthetic construct]
276.0 [0..2] [443..8]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFQIEEDRL GMRIQSETIE LTKDEKGVVG ISIGGGGPYC PCVYVVQVFD KSPAFKDGRI  60
   61 RCGDEIVAIN GITVKGERKS AVAQLIQVSL NPVKITINKL EEANTKGKTL DILIKKVKHK 120
  121 VVEFVDQDSA DALGLSRAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.39794
Match: 2gzvA
Description: No description for 2gzvA was found.

Predicted Domain #2
Region A:
Residues: [140-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTNDPLAEKE KILEENAEFY RHLVAYFGDM FQYQQKISEC QKEFGSIFCD LAAHEKQQTA  60
   61 NEAFSSFGDK HRMIAKKQSE SAVPLQKMVS DLQVYIDHV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.6
Match: 1i49A
Description: Arfaptin, Rac-binding fragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [239-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPDTRLTIKK YLDVKYEYLS YCLKLKEMDD EEVEFVAIQE PLYRVETGNY EYRVMLRCRQ  60
   61 ECRARFMKMR DDVMVKIELL DQKHVRDIAQ HLAIFAKTMA KCQQECAEIL KERIDVPIEI 120
  121 DLEQLNLNMN TSDGKANGEE EMGQDAIVLN DNPLEGDLID VNDIGSSTEF NEPRISLRRD 180
  181 SQNDTSQPLL GAPDSPLEEL SLIDIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.045757
Match: 1i49A
Description: Arfaptin, Rac-binding fragment
Matching Structure (courtesy of the PDB):

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