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View Structure Prediction Details

Protein: CE15465
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15465.

Description E-value Query
Range
Subject
Range
gi|40743485, gi|... - gi|67538690|ref|XP_663119.1| hypothetical protein AN5515.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
166.0 [0..8] [390..789]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLTKAETIK YSSLVVLVVQ NCSLVLFMRY AMTKDRPKFL KTITVLFGEI FKCTVSLLLA  60
   61 CIEEKSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKGLRKIHHE FFVNWRDTLK VLVPSAIYTV QNFLLYVAVD NLPAATYMVT YQLKILTTAA  60
   61 FTVLVLHRRL TIQQWISLFV LFAGVVVVQY DQKMSNEREK AAAAAVLSST LAPTTTVSPF 120
  121 SNLTTTLTT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.23
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [197-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVTTASLASS KTENSVLGFI AVLIACVLSG FAGIYFEKIL KGSNVSIWIR NIQLAFPSIF  60
   61 FAFLFASVKD NSSLYQDGPN PIEIWNNMLQ GFDWAVWVTV AINAFGGLVV AVVIKYADNI 120
  121 LKAFATSLAI VLNCIAAYFL FNFRPSILFL VGASGVIAAV FAYSMYPYKA SHQALPTDAP 180
  181 KEVELQPVVE SSKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle