| Protein: | srab-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 346 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srab-12.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..7] | [313..356] |
|
Region A: Residues: [1-346] |
1 11 21 31 41 51
| | | | | |
1 MTGSQDPLVF NCSEMLQVAN SRFLRSVLYF NLFCSAVAVF YLIHTWLSIC RYKLMHFNLK 60
61 FLMKIHCAAL LIHCVPRFFL HLFDLYYYFF GVDCYDMQPS SLRCFILRFP YMFGLILSST 120
121 TTIFLMIERG FATYYSQHYE HGYKSIGVII AIFQLLCSLI LMASVFHEYD FDAPHYYCSS 180
181 ISVKFPLWVI IPEVLIIVFQ IAARIVNRCL LALNKRIRAR SVTATLSNRY QLEANMRNIR 240
241 LLQSFTLCDL IFVFTCFTLS APVHYYSSEM ERPTYHALVE VVNFVPLYSV VMPLYLWVFQ 300
301 KKHRDTVSNT LQASLTTSSD HYFNVLNQQL SVKEGEKRQQ RKLRNR
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
