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View Structure Prediction Details

Protein: CE16313
Organism: Caenorhabditis elegans
Length: 164 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16313.

Description E-value Query
Range		 Subject
Range
gi|109039102 - gi|109039102|ref|XP_001083320.1| PREDICTED: similar to protein kinase C, delta [Macaca mulatta]
 171.0 [0..1] [164..595]
gi|33304013 - gi|33304013|gb|AAQ02514.1| protein kinase C, delta [synthetic construct]
 169.0 [0..1] [164..131]
PRKCD - protein kinase C, delta
 169.0 [0..1] [164..131]
gi|68368930 - gi|68368930|ref|XP_709325.1| PREDICTED: similar to Protein kinase C, delta isoform 3 [Danio rerio]
 168.0 [0..3] [164..136]
gi|149034217, gi... - gi|7019312|emb|CAB75578.1| protein kinase C delta [Rattus norvegicus], gi|49904281|gb|AAH76505.1| Pr...
 168.0 [0..1] [164..131]
gi|117616656 - gi|117616656|gb|ABK42346.1| protein kinase C delta1 [synthetic construct]
KPCD_MOUSE - Protein kinase C delta type OS=Mus musculus GN=Prkcd PE=1 SV=3
 168.0 [0..1] [164..131]

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Predicted Domain #1
Region A:
Residues: [1-79] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAPELQIP TVTRQSDGTK IHEISGHKFK AVGLAQPTFC SFCSKFIYGV GKQGYKCLGC  60
   61 ETVVHKRCHA LITARCTFG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.87
Match: 1r79A
Description: Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0196698141692984 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [80-164] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSSRAPVPAE TTNLKTRRSR SASEEPPSNT HHFNKHFFTR PTFCDHCGSM LYGLTKQGVQ  60
   61 CTDCHANVHF RCQEKVLRNC GIQCQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0980674097362609 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle