| Protein: | sra-39 |
| Organism: | Caenorhabditis elegans |
| Length: | 375 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-39.
| Description | E-value | Query Range |
Subject Range |
|
|
184.0 | [0..7] | [315..28] |
|
Region A: Residues: [1-375] |
1 11 21 31 41 51
| | | | | |
1 MEGCETRGQL YYHPAYLFAI IFQGTSGYLT FPILFIILKK YAFKVYYHPN LVFLMMLNVV 60
61 SCLLLGGLTA WSATNFFLNL MIKPSPCDLL LKTYFCSKIR GTFLFAFCLV TTSHAGILLE 120
121 RSWATYSVKN YERQGRALGT ILAIVAVAVA ATAIFILLLP EDGEEMITTC LTFSASKSIG 180
181 SRVYVMFFVQ LLLDAVISIV HLVLYRYNKN IDKHGSTSLS EQFQRNENVK TLKQVTPLLI 240
241 LSNVTIGVYI FIVSVFRLYK DYLPPNWYEI IAANLFIMPH MPFMFTSLIL VELWLGKKRQ 300
301 DRIHKDMMAS QDVPLDDQFH IAMENWDVHF QSRLKAQARA NRKPLSANWT SSTLITKFKK 360
361 RQTTVAVISI PPSPS
|
| Detection Method: |  |
| Confidence: | 46.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
