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View Structure Prediction Details

Protein: inx-14
Organism: Caenorhabditis elegans
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-14.

Description E-value Query
Range
Subject
Range
gi|54398902 - gi|54398902|gb|AAV33850.1| pannexin 2 [Aplysia californica]
391.0 [0..14] [428..14]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWEIPIIGD FITKPFKAAK LYEFYDRLHL FTVYLLGFFV LLTGAKQHFG NPIDCMLPKQ  60
   61 HDDLKSWRDY IHNFCLFYGT FRYDVSNGTS EFGSYTEDAS VN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQWVPFFFA FQVCCFLLPF WCWAYMQKLI YIDMAFIVDY SGKINSEKTF EKTKEKVDRI  60
   61 VNYMHDHFKF RRAHKMGYLS WITFNSAFPS VLYSLTKLFF ITNVIIQVNL VCKFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [218-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVDSWTWGFD LLGKFIHPTP RAPEFSSFSD KQRFAAILTD GSYNRFQYFP ILVGCEYQLQ  60
   61 ESVSNFVNHK AQCIIPMNVI NEKIFIGLYF WLLVLTALSV IGTVKWILRI KSKKLNEVMI 120
  121 YKLIKKSLER EPFDSNIHDH RYNFVHKYLC ADGILLIYFM MDTNGFLKTE EVIGALFKKY 180
  181 CSDAGLEPLQ TAPTLTSSPR DLAYSETNYG FAAPQKI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle