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View Structure Prediction Details

Protein: CE18002
Organism: Caenorhabditis elegans
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18002.

Description E-value Query
Range
Subject
Range
CE07626 - status:Partially_confirmed UniProt:Q23469 protein_id:AAG00054.1
466.0 [0..6] [540..4]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKAKLKNFQ KILLLSVTTT IYLTTFFILP SILENGDQYL QQYDSFKQDV ARKFFGDPVT  60
   61 NTDAYIVNTY YYPTSKSLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNALAMVLLM NRSTMRNITK YKMQLVATNS SGSSVTVVPK LLKCELPIRI SVPVVDREAY  60
   61 ANCEYSNIVA HVTALPSLKK LEMVSGDSKF DLKRTNRDSV FDKIQMTFLQ IQLKLARSTA 120
  121 PAPVIICIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [209-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQFVAEQWQI FVAHAHISHN FGGHLHLYVT SMLESYFDLV LEYEKLGYVT LDFWMRYNFA  60
   61 NSALNSPEPN SNVEWRNQAG AHTDCLLQYK EAAKFITFAD LDDVLIPRGY ETYFHEFASL 120
  121 FYFHPNIRTF QYPKQEMMFH NKPNISDFHM IEQFSHSWFA NTQATGKIVA RPSDLNSMWI 180
  181 HRSFNVPDKN FQVVSHNFFI HLQRPVDTDG QDPITYEMRS FSIAKHLKLN ASVMQPVQED 240
  241 FVKVLNSSRY QKITAKLPKN TYYFPILFRC YYEKYYNAQD DTCPNGEDCL IPQRSDLPCI 300
  301 HSDADYKSGP SMTPVTFHYH KNPRWSKNIG CYN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.2
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.117862115002202 bayes_pls_golite062009
catalytic activity 0.075405962065044 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.00643109218840909 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle