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View Structure Prediction Details

Protein: CE19341
Organism: Caenorhabditis elegans
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19341.

Description E-value Query
Range
Subject
Range
gi|39581951, gi|... - gi|39581951|emb|CAE73813.1| Hypothetical protein CBG21363 [Caenorhabditis briggsae], gi|187022624|em...
455.0 [0..18] [477..1]

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Predicted Domain #1
Region A:
Residues: [1-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFLSKNVQ NPLSVCTLIM LYNTMWTTYL HISRPRFDTT LSTERKLFIL ERMIESFRKG  60
   61 GQMCKNERYY CKRPETAHVD CGRVLRGDKT YLETLSGKYR IPLIPNEQLN MSCEAISERV 120
  121 VPKNAKFKPL KLNGTAFARV VYVEYEFIEK QVQAAYHYQN WFCFAVDRNS SIEFQKKMKQ 180
  181 LAEGLPNVIL LPVTESYDED GHNINSAHYR CMMELVTRPG WSYLVLLQNF DLITKSVYEM 240
  241 DRIFELLDGA NDVNLASKRP GRRKPNLKWD LKTLKLFRNK TIINKTILNS EIEISTGYVQ 300
  301 ASLSRAAAQW LINDVDVTTF MNQLNQSAKA CDEQFISTFQ INEALKMPGH FTSQCIRRGI 360
  361 SLPSFTRFSR WVLPDQNTRE NCSTQAVRHN LCLFGIEDFR TLSEMPVLLF NKVIPGFDYS 420
  421 IVDCTAELMY NRTFLGQVDH ELREDFYRNL VNVQFHKNHN TPGYILNCTS DFEALNYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle