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View Structure Prediction Details

Protein: CE20367
Organism: Caenorhabditis elegans
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20367.

Description E-value Query
Range
Subject
Range
gi|157755349 - gi|157755349|ref|XP_001670018.1| Hypothetical protein CBG21755 [Caenorhabditis briggsae AF16]
DMON2_CAEBR - DOMON domain-containing protein CBG21755 OS=Caenorhabditis briggsae GN=CBG21755 PE=3 SV=1
183.0 [0..4] [180..3]
CE20369 - status:Confirmed UniProt:Q9XWC1 protein_id:CAA21756.1
164.0 [0..1] [168..1]
gi|55245300, gi|... - gi|58378121|ref|XP_308260.2| ENSANGP00000009343 [Anopheles gambiae str. PEST], gi|55245300|gb|EAA039...
160.0 [0..17] [171..693]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLAIVFAF VFIPSSSSVT CDFKNELVSM NWNVKNNKIQ IHFEHNNLTE NRWTSIAFGD  60
   61 GPGMNNLESI IFSRREDNVI TTNSGYTPKK KKVVVDDVSY VTVNDVQITG NKLKVTVSRP 120
  121 LGPAGPRNFS LDQCLNWMVV PGGSLSNGKF KKHHGKIFFI KDVCAAKCTA ERIQRINSNK 180
  181 AL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.9
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle