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View Structure Prediction Details

Protein: CE20368
Organism: Caenorhabditis elegans
Length: 168 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20368.

Description E-value Query
Range
Subject
Range
DMON1_CAEBR - DOMON domain-containing protein CBG21753 OS=Caenorhabditis briggsae GN=CBG21753 PE=3 SV=1
gi|157755353 - gi|157755353|ref|XP_001670020.1| Hypothetical protein CBG21753 [Caenorhabditis briggsae AF16]
198.0 [0..1] [168..1]
CE20369 - status:Confirmed UniProt:Q9XWC1 protein_id:CAA21756.1
187.0 [0..1] [167..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSIAVLSA LLFAFASAKT CKYDSSDFEV YWRFANNSIN MQFMNTDIKN NEWTGVGFGD  60
   61 DKNNFVGVFF MVSNNQVTVR TGSTTQHGPP TFTQSGTNTA SVSTQALNYF PEDKTMSAVV 120
  121 QIPIQFNGRS LQSCQKWRFV KSGKIENGQL TRNDKSPKEK KVCPMECN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.95
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle