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View Structure Prediction Details

Protein: CE20369
Organism: Caenorhabditis elegans
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20369.

Description E-value Query
Range
Subject
Range
gi|39586433, gi|... - gi|39586433|emb|CAE74092.1| Hypothetical protein CBG21752 [Caenorhabditis briggsae], gi|187022374|em...
gi|157755355 - gi|157755355|ref|XP_001670021.1| Hypothetical protein CBG21752 [Caenorhabditis briggsae AF16]
179.0 [0..1] [163..1]
CE30044 - status:Confirmed UniProt:Q8WTL3 protein_id:AAK68516.2
161.0 [0..1] [162..1]
gi|55245300, gi|... - gi|58378121|ref|XP_308260.2| ENSANGP00000009343 [Anopheles gambiae str. PEST], gi|55245300|gb|EAA039...
155.0 [0..17] [162..693]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQTIILLL ISIGTVASQT CKFSKSAVKA NWKIQNGALQ IQYQNNRITN NQWTAIGFGP  60
   61 GMSNLNVIVF IVQNSQVTVR TGRTSGYGPP SFDNQSSVSV QMANHSGSTL NALVNVPLNF 120
  121 NGMNIQNCQT WNFVQSGPIN NGNMGVHTSR PDQVNNVCAS QCR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.48
Match: 1d7cA
Description: Cytochrome domain of cellobiose dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle