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View Structure Prediction Details

Protein: CE20611
Organism: Caenorhabditis elegans
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20611.

Description E-value Query
Range
Subject
Range
CE33576 - status:Confirmed UniProt:Q86GV1 protein_id:AAO61425.1
217.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIVAILAC HVAISAAYIS SEDLEKPSSA DKPVHEKNHC TRSELMRMGG RLVKWFKDVH  60
   61 AQESGADHTL KLHSVPCRVE VGWMFNQWDG NQDGKLSKAE LRPIERGGNE ACVEEFIDMC 120
  121 DDMVVDGSIS VDEWCDC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.221849
Match: 1sraA
Description: STRUCTURE OF A NOVEL EXTRACELLULAR CA2+-BINDING MODULE IN BM-40(SLASH)SPARC(SLASH)OSTEONECTIN
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.482343911625985 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [138-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTFSDDLRHE PPCHKAKHDV DPHLLGVFLP RCDLEGFYKP EQCHDGNCWC VDRYGREFDK  60
   61 SRVQNTLPDC GQYASDMTEE DIAFLRERL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.045757
Match: 2h7tA
Description: No description for 2h7tA was found.

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