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View Structure Prediction Details

Protein: CE21796
Organism: Caenorhabditis elegans
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21796.

Description E-value Query
Range
Subject
Range
gi|186683820, gi... - gi|23129851|ref|ZP_00111674.1| COG4122: Predicted O-methyltransferase [Nostoc punctiforme PCC 73102]...
172.0 [0..3] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVAKSYKS SDPVIAYCSE HTTIQSPLQA ELLKETLDNA PMSMMLGAPE VLTFGQNFIR  60
   61 SFGGRRVIDV GTYTGASALA WALAVPDDGE VFTFDIDHTN YKKFGVPIIS KCEKTFKKIR 120
  121 AIEGSALDGL DKLIADGQSG TFDFAFIDAD KVNYSNYYDR AVTLLRKGGV IFVDNSLWNG 180
  181 SVCDPARRTE PSTVAIHQAN DKIFKDDRTY SALINLGDGT HIAFKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.09691
Match: 1suiA
Description: Alfalfa caffeoyl coenzyme A 3-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 0.999964866871553 bayes_pls_golite062009
methyltransferase activity 0.558878917426836 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.557560946446304 bayes_pls_golite062009
binding 0.348263200169904 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.0605581837493382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle