| Protein: | hsf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hsf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..1] | [671..1] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MQPTGNQIQQ NQQQQQQLIM RVPKQEVSVS GAARRYVQQA PPNRPPRQNH QNGAIGGKKS 60
61 SVTIQEVPNN AY
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [73-273] |
1 11 21 31 41 51
| | | | | |
1 LETLNKSGNN KVDDDKLPVF LIKLWNIVED PNLQSIVHWD DSGASFHISD PYLFGRNVLP 60
61 HFFKHNNMNS MVRQLNMYGF RKMTPLSQGG LTRTESDQDH LEFSHPCFVQ GRPELLSQIK 120
121 RKQSARTVED KQVNEQTQQN LEVVMAEMRA MREKAKNMED KMNKLTKENR DMWTQMGSMR 180
181 QQHARQQQYF KKLLHFLVSV M
|
| Detection Method: | |
| Confidence: | 43.69897 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.77201910025409 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| DNA binding | 3.44642410378325 | bayes_pls_golite062009 |
| nucleic acid binding | 3.25777282180864 | bayes_pls_golite062009 |
| transcription factor activity | 2.83460075788873 | bayes_pls_golite062009 |
| transcription repressor activity | 2.39237599101586 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.08341148210578 | bayes_pls_golite062009 |
| transcription activator activity | 1.98504395280033 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| transcription factor binding | 0.63938506997853 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.49916895549368 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.0565989703351002 | bayes_pls_golite062009 |
|
Region A: Residues: [274-339] |
1 11 21 31 41 51
| | | | | |
1 QPGLSKRVAK RGVLEIDFCA ANGTAGPNSK RARMNSEEGP YKDVCDLLES LQRETQEPFS 60
61 RRFTNN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [340-517] |
1 11 21 31 41 51
| | | | | |
1 EGPLISEVTD EFGNSPVGRG SAQDLFGDTF GAQSSRYSDG GATSSREQSP HPIISQPQSN 60
61 SAGAHGANEQ KPDDMYMGSG PLTHENIHRG ISALKRDYQG ASPASGGPST SSSAPSGAGA 120
121 GARMAQKRAA PYKNATRQMA QPQQDYSGGF VNNYSGFMPS DPSMIPYQPS HQYLQPHQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [518-671] |
1 11 21 31 41 51
| | | | | |
1 KLMAIEDQHH PTTSTSSTNA DPHQNLYSPT LGLSPSFDRQ LSQELQEYFT GTDTSLESFR 60
61 DLVSNHNWDD FGNNVPLDDD EEGSEDPLRQ LALENAPETS NYDGAEDLLF DNEQQYPENG 120
121 FDVPDPNYLP LADEEIFPHS PALRTPSPSD PNLV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
