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View Structure Prediction Details

Protein: CE22605
Organism: Caenorhabditis elegans
Length: 629 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22605.

Description E-value Query
Range
Subject
Range
CE18974 - status:Partially_confirmed UniProt:Q9XU06 protein_id:CAB07287.1
533.0 [0..1] [629..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFIHTSLTR LMRFAVDQTK DIIEPLMVTK VLTEFSESEN DGLSHYAHYA KFHNYLVPNM  60
   61 AKLAEYSIEE RVRVIFGFAA VVSDDFLKQI QREGLVHLDK KKRICKFTSH NGKWKLEGDH 120
  121 SHSARMKRRW SMRV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.376751
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVVVGLPSLM NFLVEKTKDI IEPMLASAAF REFSESEDGG LPEHAYYNHF HKNVAPNMAK  60
   61 IEEYSIEERV RVMFALAGRV SADFRAQTKG LVELDDGKRI SKFTSTDGKL KLEGDHSDSA 120
  121 RRKRSAAFYR KTDHHCRSAN DSKPRRKNGR QSDSEFSDKS GSDEDDVESA I

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 60.508638
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYGNSPKRAR CEKSADPEMH VSSGSDDDEV EDVGGMDEEP VLLPIDSDES HIGHLQNGEE  60
   61 MMVEDDNQPI PEDPQYSANS SHQGRRMSGR IQEKLSASIA QETTDAAVAI PHVPILNPPF 120
  121 ESDDEEVKYI GAVKGQPKPG PIESVFDQIN NRDHFQGNQE YRNQSISERK VDVPLFVEHQ 180
  181 QISLSAENRA TSAEWKSIFL HDFLKQLTQF ICFFECSELA EIKRNIKEVM ADEGKISSFQ 240
  241 KLEIIDIRTV LGAFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [561-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGVSRKIKST GSNNSTMKAK DFLVTFKYFL LGLDFSELLE LSTVFKRKLT SSHVQRHPPS  60
   61 SPKPTLHNF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle