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View Structure Prediction Details

Protein: CE22740
Organism: Caenorhabditis elegans
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE22740.

Description E-value Query
Range
Subject
Range
gi|73968420 - gi|73968420|ref|XP_531640.2| PREDICTED: similar to nascent polypeptide-associated complex alpha poly...
247.0 [0..2] [195..170]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSTETRQK EVKEPQVDVS DDSDNEAVEQ ELTEEQRRVA EAAGLGDHID KQAKQSRSEK  60
   61 KARKLFSKLG LKQVTGVSRV CIRKSKNILF VINKPDVFKS PGSDTYIIFG EAKIEDLTQH 120
  121 AQMSAIENLK PTREAPQLKT VEEDENEDVE EDSTGIEEKD IELVISQANT TRNKAIRALK 180
  181 EADNDIVNAI MSLTM

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Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1tr8A
Description: Crystal Structure of archaeal Nascent Polypeptide-associated Complex (aeNAC)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle