| Protein: | dsl-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsl-2.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..3] | [321..1577] |
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MRNLFVFFSL SSLFLLSNAM FIDPGKSGAL ELVLKVESSQ TTQIAVNSNV TSIDLHTNST 60
61 HYIEYREMDF RGIISIRLQT KFMKSRYGSR NWHMVVFDPL QGIINVDQLP RPFDGMVVKV 120
121 KCERNWFGEY CDKYCDEDAA HLVGMRCNKK GVMGCNEGFC GPNCDQTKSQ CSMMCACEND 180
181 APCYSSTDPR TSREYVYCEC LTGFEGKYCQ NVTFPPEMPK FRTVMLGANG KIFKVLENKN 240
241 LVKNEFYWAN SSAKFELLAE NAENFPAPES FWQLAREFLE DLFSETDPWT PVIFIGIFGL 300
301 FLVFHCQAVD VESSKKLIVF DV
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
