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View Structure Prediction Details

Protein: CE24188
Organism: Caenorhabditis elegans
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24188.

Description E-value Query
Range
Subject
Range
CE16162 - status:Confirmed UniProt:O45603 protein_id:CAB07219.1
550.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPSRTVLR DLTATRYVAN YAEEDRLETA RAGCSSLPPQ PNINHDVIIE GHGEDVELVE  60
   61 DENYCSVHRI DETPKLVDKK PSKTIIRDEA VKVLRHIQTV PIENLRLKRY DYFSQRWFHT 120
  121 TRESEKALVE HVFLHPNQRP HYFAAQCRKL SVEDISSLIL TSLLTEPKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGQNVARFAI QTTNEMSFQT LFALLEQLEK ENERFQMTDS FVVATLIRSQ TKRTITRLLR  60
   61 TTHCREYGNL EPGLDSQGRL MTSTASITCS IRGKRHVETR IVYKNNSSTR DPFRRNRYIE 120
  121 LEQTVKCMNR RVLIVEEPVE IHEFEVEKDM ISLENGIAPV DDLISFLETF ELDEEDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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