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View Structure Prediction Details

Protein: mtd-1
Organism: Caenorhabditis elegans
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mtd-1.

Description E-value Query
Range
Subject
Range
gi|187023912, gi... - gi|39584432|emb|CAE72570.1| Hypothetical protein CBG19757 [Caenorhabditis briggsae], gi|187023912|em...
gi|157748653 - gi|157748653|ref|XP_001669421.1| Hypothetical protein CBG19757 [Caenorhabditis briggsae AF16]
458.0 [0..26] [257..21]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSLLLLVF FLSIGWARYC VHNEKSWCQG HNIWGWCFHN KSSGVFNCDD NAFCVSQEQL  60
   61 KNKKSSGCFL RDNSSICCCN DADGCNLGFI GVQPKYAHGQ QCTNSMEVPN EDIRQFRPCD 120
  121 DPFCYSVLTA EDDGGPTTVT RGCHSRKMVM HHMSKNEDDK YQNNTKWRET KQIAEMPSCA 180
  181 EILKDQPKVN GTTSMCVDFT YDQEAEDGEE VDEPIKMKGR LCCCAGSNKC NEHAMWADEG 240
  241 ISLTEMLEEI EARKVPVDSS APVNIILSIA FSIFLIHF

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle