| Protein: | selb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for selb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
340.0 | [0..1] | [412..1] |
|
Region A: Residues: [1-500] |
1 11 21 31 41 51
| | | | | |
1 MTSPPSTSSS VGPLNLGILG HVDSGKTTLT RRIAELGSTS AFDAHATSTT TDGIRRNTLD 60
61 LGFSTMTSLS GRRLALIDCP GHSGLIRAVL AASTVFDMAI VIIDVVAGIQ PQTAEHLLLA 120
121 SKFCPNRVII VLNKCDLAEK SKISESAKKV RKGLKSMGVD ENSPIVEMSL ADGYFKEEML 180
181 QNLKLAIESR IFEPKRDEEG EFLIAIDHCF AIKGQGTVLT GTVIRGVLRL NTEIEFPALN 240
241 EKRRVKTLET WKQRVGQVAA GARAAFLVAP SFDEHRFSRC ICGPLGTLKS TKFVLATVEP 300
301 IQFFRKSINS KSKIHVAVAF ETVMAECQFL KEKENGEFEM LPSLLAPCQV LFSFEKSIFL 360
361 PENYSNPFMA ARLEQQPGSG CRFAFSGIFS QILPENGKNL PPRFTRKCRK GHVERVEKDG 420
421 FSAICTGMFK AETNFDVFRG FQICTSSGPR GKIEGAFGKS GKFRVTFAEK IDGILTEKEE 480
481 ISLFLKKYHN ENRLVSYVPD
|
| Detection Method: |  |
| Confidence: | 46.69897 |
| Match: | 1wb1A |
| Description: | Crystal structure of translation elongation factor SelB from Methanococcus maripaludis in complex with GDP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 3.43310971482123 | bayes_pls_golite062009 |
| structural molecule activity | 3.19024260989331 | bayes_pls_golite062009 |
| translation elongation factor activity | 3.12363774852502 | bayes_pls_golite062009 |
| nucleic acid binding | 2.60981339834849 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.27248294660956 | bayes_pls_golite062009 |
| binding | 2.263388192549 | bayes_pls_golite062009 |
| DNA binding | 1.7904783386531 | bayes_pls_golite062009 |
| transcription regulator activity | 1.68903321260301 | bayes_pls_golite062009 |
| translation regulator activity | 1.62528736558737 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.60662288414996 | bayes_pls_golite062009 |
| transcription factor activity | 0.603758349693077 | bayes_pls_golite062009 |
| translation termination factor activity | 0.269303802954244 | bayes_pls_golite062009 |
| translation release factor activity | 0.252222008028593 | bayes_pls_golite062009 |
| protein binding | 0.242047208982959 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
